Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832956.1_cds_XP_016505066.1_18441
CDS Infomation

[gene=LOC107822997] [db_xref=GeneID:107822997] [protein=zinc finger CCCH domain-containing protein 34-like] [protein_id=XP_016505066.1] [location=join(2317..2388,3135..3245,5789..7213)] [gbkey=CDS]
Sequence

ATGGAGGAAGAATTGTTAAAGCGCAACACTGATTGTGTCTATTTCTTAGCCTCTCCCCTC
ACTTGCAAGAAGGGAATAGAATGTGAATATAGACATAGTGAGATAGCTAGGCTCAACCCC
AGGGACTGTTGGTACTGGCTGGCAGGAAGCTGTCTTAATCCAACATGTGCTTTTCGGCAT
CCGCCATTAGAGAGCCGTGCTGAGACATCATCGGAATCTGCTCTTCCACACAATAAAACT
GCAGTGCCTGTTAACAAGACAAATGTTCCCTGTTACTTCTATTTCAATAGCTATTGTAAT
AAAGGTGAAAGATGTTCATTTCTGCATGGACCTGGTGATGGTACAACTGCATGGAAATCC
TCGAGTATAGCGTCTGGAGTCCCTGAAGGACCAACAGCTGAGAAAAAGACGTCCGCAGGA
AGTGAAACTGGTCCTGCATCAGTGGAGAAGCACTATAATTCTTCTGAAACTGGGTCCAAG
GCAGCAGCACATGAATATATCAAGTCAAAAGTGCATCTCCCTTCAGTGAGTAATGATGTT
GGTGAGCAGAGCGCTTCTCATGATAGTTCAGGATCTCCTTCTGAAGAAGCTACAGCTGTA
AGGTTAGATTCCTTAGTCCCTGATGAAGCCTTTGCCCAAGGAGGATCCGATTTGTCCCCC
AACCGGAGCTCAGACGAAGAAGTGGAGGAAATTGAGGAGAGAGAGGAGTGGTTGGAATCA
TCTCCCGGTTTTGATGTTCTTGTTGATGATAGAGTAGAAGGTTTGAGTCACGAAGATGAT
CACAGTTACCTACTGCATCATGATATGGAAGACAGGGAGCTTGATGAACGGTTTACTGGA
TATGATTTTGAGAACAACCTTGAGTATGATCCTGCATATCCAGACTTGAGAATTGTGTCT
GAAGAAGAACTAGACGATTCTTATTGTAATAATGTTGAGAATCATGAGATAAATGAATAT
GTCAAAGAAATCGTTATCCCTGCTCGTGGAAGACAGAGTGTACCACTAAAAAGAAAGTTG
CCCAGAGAACCGGATTGTCGTGGCAGAGGCAATGTGGACCTTCTGAAGAAGCGGCGAGTC
ATTGAAAGTGATCCTCCAAATTACTTGTCTAGAAGGTTAGACCTGTCTAGGTTTAATGCT
CGTGAGCATCGCAGGGATAGGCATCAGCCACAGGGTTCTCAGTGGATGCCTCAGAGACTG
GCTTCAAAAGTGGAAAGCAACGCTTCTTTCTCCTCCGGCTTTGTAGATGCCACTCTTCTG
GACGGTGCCAATCAACTGAAGAAGTTGAGACAATCCCACAGAAGCAGTTGCAGGCAGCAG
CATTTCAACGACAGGAGACGGGGCAGGTTGCGGCCTTTTGCAAATGAAACCCCTAGGAGG
ATGGCTTCTAGGCAGAGATTGACTGAAGTTCCTAAGATCTTTGGTGGACCAAAGACACTA
GCTCAAATTAGAGAAGAAAAGGTAAGAGGAAGAGAAGATGGATATTCTTCTGAGAGAATT
GTGCCATCTGGAGGAAATGAAAGAGAAGATTTTTCAGGTCCAAAACCTCTGAGTGAAATT
CTCAAAGACAAAAAGAGGCTGAGTTCAGTAGTGAACTTAGGTAATTAG

Peptide Sequence

PEP ID

XP_016505066.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 34-like [Nicotiana tabacum]
Sequence

MEEELLKRNTDCVYFLASPLTCKKGIECEYRHSEIARLNPRDCWYWLAGSCLNPTCAFRH
PPLESRAETSSESALPHNKTAVPVNKTNVPCYFYFNSYCNKGERCSFLHGPGDGTTAWKS
SSIASGVPEGPTAEKKTSAGSETGPASVEKHYNSSETGSKAAAHEYIKSKVHLPSVSNDV
GEQSASHDSSGSPSEEATAVRLDSLVPDEAFAQGGSDLSPNRSSDEEVEEIEEREEWLES
SPGFDVLVDDRVEGLSHEDDHSYLLHHDMEDRELDERFTGYDFENNLEYDPAYPDLRIVS
EEELDDSYCNNVENHEINEYVKEIVIPARGRQSVPLKRKLPREPDCRGRGNVDLLKKRRV
IESDPPNYLSRRLDLSRFNAREHRRDRHQPQGSQWMPQRLASKVESNASFSSGFVDATLL
DGANQLKKLRQSHRSSCRQQHFNDRRRGRLRPFANETPRRMASRQRLTEVPKIFGGPKTL
AQIREEKVRGREDGYSSERIVPSGGNEREDFSGPKPLSEILKDKKRLSSVVNLGN

Transcript Sequence

Gene sequence data has not been registered.